Class for fit to evolutionary sequence (time-series) models
Source:R/as.evoTS.multi.URW.fit.R
as.evoTS.multi.URW.fit.Rd
A function that combines useful information summarizing model fit.
Usage
as.evoTS.multi.URW.fit(
converge,
modelName,
logL,
ancestral.values,
SE.anc,
R,
SE.R,
method,
K,
n,
iter
)
Arguments
- converge
info on model convergence
- modelName
description of the model
- logL
log-likelihood of model
- ancestral.values
maximum-likelihood estimates of the ancestral trait values
- SE.anc
standard errors of the estimated ancestral states
- R
maximum-likelihood estimates of the parameters in the R matrix
- SE.R
standard errors of the parameters in the R matrix
- method
the parameterization used: Joint
- K
number of parameters in the model
- n
sample size
- iter
the number of times the optimization method is run from different starting points. Default is NULL, meaning the optimization is run once.